SKILLEMALL.ai
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AF pharmaclaw-chemistry-query

Chemistry agent skill for PubChem API queries (compound info/properties, structures/SMILES/images, synthesis routes/references) + RDKit cheminformatics (SMILES to molecule props/logP/TPSA, 2D PNG/SVG viz, Morgan fingerprints, retrosynthesis/BRICS disconnects, multi-step synth planning). Use for chemistry tasks involving compounds, molecules, structures, PubChem data, RDKit analysis, SMILES processing, synthesis routes, retrosynthesis, reaction simulation. Triggers on chemistry, compounds, molecules, chemical data/properties, PubChem, RDKit, SMILES, structures, synthesis, reactions, retrosynthesis, synth plan/route.

modbender/skill-library-mcp Agent Skills author: modbender MIT 13 files body ≈ 1 597 tokens Open the sourcegithub.com↗ analyzed 2 d ago

Chemistry agent skill for PubChem API queries (compound info/properties, structures/SMILES/images, synthesis routes/references) + RDKit cheminformatics…

As a process F 39/100 · Will not run — References files that are not bundled: [c:4]

IntegrationAI and agentstype and topics are labelled automatically from the skill text
Runs in: OpenClaw Claude / Claude Code ChatGPT / Codex Gemini CLI Cursor GitHub Copilot / VS Code Qwen Code Kimi Code CLI Z.ai (GLM) DeepSeek (Deep Code) Mistral Vibe LangChain (deepagents) Goose OpenCode
JSON
Technical rating
A
91/100
safety, quality, tests
Safety 60%
100
Quality 40%
77
Run on models
none yet
Process rating
F
39/100
Will not run
References files that are not bundled: [c:4]
Tools and files w 18
0
Result and completion w 14
0
Inputs and preconditions w 11
0
the three weakest of ten parameters · all ten

How to improve

  1. The text references files that are not there: add them or drop the references.
For the model run — optional
  • Your own cases (evals/evals.json, 4–6 real requests with expected answers): the full check would then run those instead of a model-drafted suite.
  • A spec.yaml with trigger phrases and assertions — a behaviour contract for CI; `skilltest init` writes a template.

Guard findings · 0

✓ No critical or high findings

Files scanned: 13. Evidence is masked. Grey chips explain why severity was lowered.

Against the Agent Skills spec

  • warning missing-ref reference to a missing file: [c:4]
  • note frontmatter-key unknown frontmatter key "type"
  • note frontmatter-key unknown frontmatter key "dependencies"

Process rating: all ten parameters 39/100

Will not run. References files that are not bundled: [c:4]
  • 0Tools and files. 1 referenced file(s) missing: [c:4]
  • 0Result and completion. Does not say what the result is
  • 0Inputs and preconditions. Does not say what the process needs to start
  • 0Failures and branches. Linear process with no failure handling
  • 0Progress reporting. Says nothing while it works
  • 70When it triggers. States when to use, but not when not to
  • 85Steps. 39 steps, 1 vague phrases
  • 100Consistency. Name and required fields are in place
  • 100Execution cost. Instruction body is 1597 tokens
  • 100Running it twice. No mutating operations

Everything here is measured from the skill text rather than judged by a model, so the numbers are checkable. A parameter weighs more when it is a more common reason for the process to stall.

Quality signals

  • +5Description has no quoted example phrases that should trigger the skill
  • +4Description does not say when NOT to use the skill (false activations)
  • +3Output format is not stated: the model decides each time
  • -31 of 8 scripts are never mentioned in SKILL.md
  • +1No license
  • +2Single-language instructions
  • +3Description length 622: enough signal without eating the budget
  • +4Structure: 12 headings
  • +3Step-by-step instructions: 39 items
  • +4Has examples (5 code blocks)
  • +4Reference files are cited in the instructions (1 of 1)

Quality base 70; lint remarks subtract, signals add up to 100. Result: 77.